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Sheppard must race to save McKay and Daniel Jackson from an Ancient laboratory before Todd, who has hijacked an Earth battle cruiser, gets there first.
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NEWS & SPOILERS
(Newest information is added to the bottom)

This episode is Part 2 of the mid-season two-parter, following "First Contact" and guest starring Michael Shanks ("Daniel Jackson").
"First Contact" (part one) should air on SCI FI Channel in the United States in September. While the cable network has not announced the schedule for Atlantis Season Five yet, based on past years we expect "The Lost Tribe" to premiere in January after a mid-season break of about three and a half months.
Daniel and Rodney McKay have discovered a research laboratory on another planet. The lab once belonged to the Ancient scientist Janus, who tended toward inventions and experiments that the other Lanteans did not look upon favorably. And, much to their surprise, Daniel and Rodney are not the only ones there.
Meanwhile, "Todd" the Wraith (guest star Christopher Heyerdahl) has seized control of the power Earth battlecruiser Apollo, which has been outfitted with Asgard transporters, weapons, and defensive technology. Though he and his forces have subdued the ship's 200-person crew, Ronon and Keller still remain at large. Todd accesses the ship-wide P.A. system and threatens to begin killing crew members unless they turn themselves in.
 Christopher Heyerdahl returns as "Todd," the on-again, off-again ally of the Atlantis team. |  | Todd is on his way to Janus's laboratory, where he hopes to shut down a device (called the "Attero device") that is threatening his new alliance. Racing to get there first is Atlantis's Colonel John Sheppard and Dr. Zelenka, who know that Todd has hijacked their ship and is on his way to the facility. The two of them have joined up with a Travelers ship ("Travelers"), under the command of a Traveler captain named Katana.
In the hopes of getting his ship's hyperdrive running at maximum output, Katana brings Zelenka and Sheppard into the aged and cluttered engineering room and introduces them to his chief engineer -- Mila, who is only 15 years old. Mila has been working with the hyperdrive engine since she was 4 years old, and is a brilliant young woman who will do whatever is necessary to get the job done. Where Radek is cautious and doubtful that the job can get done (safely, at any rate), Mila shows him otherwise.
If they cannot reach Janus's lab before Todd does, Daniel and McKay may not survive. (GateWorld news report)
Guest characters include Daniel Jackson, Todd, Katana, Mila, and one of Todd's Wraith (nicknamed "Kenny" in the script).
"I promised to give you all the scoop on Katana, the Traveler who will be making her first appearance in the mid-season two-parter. Well, I'm pleased to tell you that Daniella Alonso has been cast in the role. Those of you not familiar with Daniella's work may want to check out her 11-episode arc in Season Two of Friday Night Lights. She was excellent in FNL and is doing a wonderful job for us on 'The Lost Tribe.'
"Another introduction of sorts and one that's long overdue. Sharon Taylor plays one of our gate technicians on Stargate Atlantis. She first caught our eye playing the role of a Replicator in the episode 'Lifeline.' She had such a unique look that we brought her back as a real, flesh and blood member of the expedition. A line here, a line there, and then it was only a matter of time before something else struck us about Sharon. She's damn good. We continued to bring her back, increased her face-time, and, as a true indication that she had really made it, finally gave her character a name: Amelia Banks. And the fact that Sharon is a black belt kick boxer and could probably kick all of our asses had nothing to do with it." (Executive producer Joseph Mallozzi, in a post at his blog)
Todd and the Wraith will be taking control of the Daedalus, commanded by Colonel Steven Caldwell (guest star Mitch Pileggi) -- not the Apollo, as early sources indicated.
NEW! August 25 - "Dr. Daniel Jackson and Dr. Rodney McKay have been forced to reactivate the Attero device, a machine designed thousands of years ago to annihilate the Wraith. In doing so, they discover the reason the device was ultimately abandoned by its Ancient creator -- while destroying Wraith ships that attempt to travel through hyperspace, the weapon inadvertently causes active Stargates to self-destruct.
"Meanwhile, Todd and his troops continue to hold Woolsey, Keller, Ronon and the Daedalus crew captive, convinced that they are behind the resurrection of this deadly technology. Fearing that if Todd succeeds in destroying the device, Jackson and McKay will most certainly be killed in the process, Sheppard calls on some old allies to help him rescue his friends." (SCI FI Channel episode synopsis)
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As information is listed here while the episode is still
in production, remember that it is subject to change.
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